Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein, ybab/ebfc family | HOLDEFILI_00956 | A0Q3R4 | Negative | 859238 - 859546 | 11142.5 |
| dna polymerase iii, subunit gamma and tau | HOLDEFILI_00957 | P09122 | Negative | 859550 - 861391 | 69067.9 |
| cytidine and deoxycytidylate deaminase zinc-binding region | HOLDEFILI_00958 | P21335 | Negative | 861482 - 862027 | 19798.0 |
| hypothetical protein | HOLDEFILI_00960 | Not Available | Negative | 862146 - 862289 | 5567.93 |
| hypothetical protein | HOLDEFILI_00961 | Not Available | Negative | 862318 - 862626 | 11872.8 |
| acyl-coenzyme a:6-aminopenicillanic acid acyl-transferase | HOLDEFILI_00962 | Not Available | Negative | 862755 - 863744 | 36873.3 |
| acetyltransferase, gnat family | HOLDEFILI_00963 | Not Available | Negative | 863930 - 864355 | 16686.1 |
| serine--trna ligase | HOLDEFILI_00964 | A3CTP4 | Negative | 864404 - 865687 | 48755.6 |
| transcriptional regulator, arac family | HOLDEFILI_00965 | Not Available | Negative | 866066 - 867046 | 38241.1 |
| hypothetical protein | HOLDEFILI_00966 | Not Available | Positive | 867152 - 867301 | 5931.54 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
