Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system sorbose subfamily iib component | HOLDEFILI_00806 | Not Available | Negative | 728819 - 729292 | 18034.1 |
| pts system fructose iia component | HOLDEFILI_00807 | Not Available | Negative | 729286 - 729705 | 15950.3 |
| sigma-54 interaction domain protein | HOLDEFILI_00808 | Not Available | Negative | 729777 - 732626 | 107607.0 |
| putative rna polymerase sigma-54 factor | HOLDEFILI_00809 | Not Available | Positive | 732695 - 733948 | 48048.7 |
| fad binding domain protein | HOLDEFILI_00810 | Not Available | Negative | 734161 - 736005 | 65447.7 |
| transcriptional regulator, lysr family | HOLDEFILI_00811 | P39592 | Positive | 736152 - 737033 | 32934.1 |
| hypothetical protein | HOLDEFILI_00812 | Not Available | Positive | 737202 - 737348 | 5482.88 |
| hypothetical protein | HOLDEFILI_00813 | Not Available | Negative | 737449 - 738177 | 26389.9 |
| n-acetylmannosamine-6-p epimerase | HOLDEFILI_00814 | Not Available | Negative | 738235 - 738963 | 26814.5 |
| pts system mannose/fructose/sorbose family iid component | HOLDEFILI_00815 | Not Available | Negative | 738964 - 739788 | 30042.6 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
