Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00796 | Not Available | Positive | 719689 - 720087 | 15365.5 |
| hypothetical protein | HOLDEFILI_00797 | Not Available | Positive | 720088 - 721016 | 34872.0 |
| glycine hydroxymethyltransferase | HOLDEFILI_00798 | B9DMF3 | Negative | 721150 - 722379 | 45464.6 |
| hypothetical protein | HOLDEFILI_00799 | Not Available | Positive | 722459 - 722584 | 4543.41 |
| hypothetical protein | HOLDEFILI_00800 | Not Available | Negative | 722581 - 724059 | 57455.4 |
| hypothetical protein | HOLDEFILI_00801 | Not Available | Negative | 724172 - 724510 | 13201.5 |
| mate efflux family protein | HOLDEFILI_00802 | Q92PZ0 | Negative | 724631 - 725992 | 50155.5 |
| sis domain protein | HOLDEFILI_00803 | Q9ZJ94 | Negative | 726091 - 727161 | 39224.1 |
| pts system mannose/fructose/sorbose family iid component | HOLDEFILI_00804 | Not Available | Negative | 727207 - 728028 | 30174.8 |
| pts system sorbose-specific iic component | HOLDEFILI_00805 | P37082 | Negative | 728021 - 728803 | 28240.8 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
