Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HOLDEFILI_00726 | Not Available | Negative | 647278 - 647478 | 7392.63 |
| hypothetical protein | HOLDEFILI_00727 | Not Available | Positive | 647530 - 647651 | 4351.13 |
| hypothetical protein | HOLDEFILI_00728 | Not Available | Positive | 647776 - 648321 | 20823.3 |
| hypothetical protein | HOLDEFILI_00729 | Not Available | Positive | 648614 - 649612 | 35856.4 |
| peptidase, m56 family | HOLDEFILI_00730 | Not Available | Negative | 649857 - 651338 | 56897.4 |
| transcriptional regulator, blai/meci/copy family | HOLDEFILI_00731 | Not Available | Negative | 651349 - 651702 | 13434.3 |
| helicase c-terminal domain protein | HOLDEFILI_00732 | Not Available | Negative | 652083 - 655379 | 127542.0 |
| type i restriction modification dna specificity domain protein | HOLDEFILI_00733 | Q60296 | Negative | 655417 - 656445 | 39158.3 |
| site-specific recombinase, phage integrase family | HOLDEFILI_00734 | Q4L5V4 | Negative | 656470 - 657501 | 39888.5 |
| type i restriction modification dna specificity domain protein | HOLDEFILI_00735 | Not Available | Negative | 657509 - 658588 | 40810.5 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
