Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | HOLDEFILI_00716 | Q02522 | Negative | 636931 - 637470 | 20382.8 |
| trna(ile)-lysidine synthetase | HOLDEFILI_00717 | Q9PR68 | Negative | 637492 - 638715 | 47213.4 |
| putative stage ii sporulation protein e | HOLDEFILI_00718 | Not Available | Negative | 638866 - 640761 | 70978.8 |
| hypothetical protein | HOLDEFILI_00719 | Not Available | Negative | 640838 - 641395 | 20946.5 |
| hypothetical protein | HOLDEFILI_00720 | Not Available | Negative | 641388 - 641558 | 6534.93 |
| mate efflux family protein | HOLDEFILI_00721 | Not Available | Negative | 641643 - 643091 | 51118.1 |
| transcriptional regulator, lysr family | HOLDEFILI_00722 | P37499 | Positive | 643157 - 644032 | 32645.2 |
| glycosyltransferase, group 4 family | HOLDEFILI_00723 | O34753 | Negative | 644149 - 645411 | 45584.3 |
| mbl protein | HOLDEFILI_00724 | P39751 | Negative | 645471 - 646460 | 35464.3 |
| peptidase, m23 family | HOLDEFILI_00725 | P71044 | Negative | 646597 - 647235 | 23110.0 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
