Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00586 | Not Available | Negative | 530636 - 531268 | 23972.1 |
| hypothetical protein | HOLDEFILI_00587 | Not Available | Negative | 531271 - 531393 | 4065.76 |
| mate efflux family protein | HOLDEFILI_00588 | Not Available | Negative | 531401 - 532774 | 49378.8 |
| hypothetical protein | HOLDEFILI_00590 | Not Available | Negative | 532843 - 533007 | 6353.59 |
| putative yigz family protein | HOLDEFILI_00589 | P32437 | Positive | 532984 - 533592 | 22962.6 |
| hypothetical protein | HOLDEFILI_00591 | Not Available | Negative | 533638 - 533760 | 4279.08 |
| mate efflux family protein | HOLDEFILI_00592 | Q9KEJ2 | Positive | 534081 - 535460 | 49762.3 |
| hypothetical protein | HOLDEFILI_00593 | Not Available | Positive | 535571 - 535702 | 4971.12 |
| alpha-l-fucosidase | HOLDEFILI_00595 | Q6AYS4 | Negative | 535714 - 536955 | 47343.1 |
| hypothetical protein | HOLDEFILI_00594 | Not Available | Positive | 536927 - 537097 | 6603.3 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
