Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative diaminopropionate ammonia-lyase | HOLDEFILI_00556 | P66901 | Positive | 507857 - 509065 | 43898.5 |
| hypothetical protein | HOLDEFILI_00557 | Not Available | Positive | 509062 - 509775 | 27049.5 |
| putative excinuclease abc, a subunit | HOLDEFILI_00558 | Not Available | Positive | 509834 - 512103 | 83118.1 |
| hypothetical protein | HOLDEFILI_00559 | P29927 | Positive | 512104 - 512271 | 5816.92 |
| transcriptional regulator, marr family | HOLDEFILI_00560 | Not Available | Positive | 512547 - 513014 | 17382.0 |
| mate efflux family protein | HOLDEFILI_00561 | Q49VC5 | Positive | 513017 - 514070 | 37476.2 |
| hypothetical protein | HOLDEFILI_00562 | Not Available | Positive | 514071 - 514348 | 10239.0 |
| hypothetical protein | HOLDEFILI_00563 | Not Available | Positive | 514447 - 515373 | 34727.6 |
| hypothetical protein | HOLDEFILI_00564 | Not Available | Positive | 515478 - 516107 | 23784.7 |
| ribonucleotide reductase, barrel domain protein | HOLDEFILI_00565 | P9WH77 | Negative | 516194 - 517603 | 52572.1 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
