Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00517 | Not Available | Negative | 467603 - 467770 | 6471.26 |
| response regulator receiver domain protein | HOLDEFILI_00516 | Q9A5I5 | Positive | 467761 - 468342 | 21943.5 |
| diguanylate cyclase (ggdef) domain protein | HOLDEFILI_00518 | Q9HYT3 | Positive | 468343 - 470388 | 78437.1 |
| pas domain s-box protein | HOLDEFILI_00519 | Not Available | Positive | 470355 - 471335 | 37686.7 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HOLDEFILI_00520 | P0C0F6 | Positive | 471336 - 473582 | 83496.3 |
| hpt domain protein | HOLDEFILI_00521 | Not Available | Positive | 473564 - 473932 | 13943.0 |
| pas domain s-box protein | HOLDEFILI_00522 | P54302 | Positive | 473929 - 478431 | 168771.0 |
| hypothetical protein | HOLDEFILI_00523 | Not Available | Positive | 478428 - 478553 | 4793.01 |
| Trna-leu | Not Available | Not Available | Positive | 478566 - 478649 | Not Available |
| response regulator receiver domain protein | HOLDEFILI_00525 | Q9K621 | Positive | 478813 - 479481 | 25737.3 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
