Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HOLDEFILI_00496 | P54537 | Positive | 451783 - 452526 | 27433.6 |
| hypothetical protein | HOLDEFILI_00497 | Not Available | Positive | 452632 - 452951 | 11802.9 |
| pyridine nucleotide-disulfide oxidoreductase | HOLDEFILI_00498 | Not Available | Positive | 453184 - 455076 | 69310.5 |
| rdd family protein | HOLDEFILI_00499 | Not Available | Negative | 455290 - 455904 | 21957.4 |
| prd domain protein | HOLDEFILI_00500 | Not Available | Negative | 455921 - 457867 | 74485.3 |
| pts system, lactose/cellobiose specific iia subunit | HOLDEFILI_00501 | P26426 | Positive | 458047 - 458346 | 10803.0 |
| pts system, lactose/cellobiose specific iib subunit | HOLDEFILI_00502 | Q45399 | Positive | 458346 - 458654 | 11311.9 |
| putative lichenan permease iic component | HOLDEFILI_00503 | Not Available | Positive | 458693 - 459970 | 46125.8 |
| hypothetical protein | HOLDEFILI_00504 | Not Available | Positive | 459948 - 460187 | 8587.16 |
| hypothetical protein | HOLDEFILI_00505 | Not Available | Positive | 460151 - 460390 | 8825.91 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
