Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HOLDEFILI_00466 | Q8D9J4 | Positive | 419964 - 421001 | 38420.7 |
| abc transporter, solute-binding protein | HOLDEFILI_00467 | Not Available | Positive | 421160 - 422218 | 38344.1 |
| putative adenine deaminase | HOLDEFILI_00468 | Q835Z6 | Positive | 422327 - 424036 | 62561.3 |
| amidohydrolase family protein | HOLDEFILI_00469 | A0LMI3 | Positive | 424033 - 425346 | 48109.0 |
| hypothetical protein | HOLDEFILI_00470 | Not Available | Positive | 425736 - 425975 | 9143.5 |
| vanw-like protein | HOLDEFILI_00471 | Q47747 | Negative | 426161 - 427012 | 32726.1 |
| aminopeptidase i zinc metalloprotease (m18) | HOLDEFILI_00472 | Q97K30 | Positive | 427078 - 428625 | 56999.0 |
| transcriptional regulator, tetr family | HOLDEFILI_00473 | Not Available | Negative | 428753 - 429346 | 22809.2 |
| lpxtg-motif cell wall anchor domain protein | HOLDEFILI_00474 | Not Available | Positive | 429472 - 432975 | 127220.0 |
| sortase family protein | HOLDEFILI_00475 | Not Available | Positive | 432972 - 433556 | 20862.0 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
