Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00456 | Not Available | Positive | 411360 - 412277 | 33613.3 |
| sis domain protein | HOLDEFILI_00457 | Not Available | Positive | 412288 - 413364 | 40135.5 |
| hth domain protein | HOLDEFILI_00458 | Not Available | Negative | 413801 - 415696 | 71157.4 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HOLDEFILI_00459 | Q9HVV4 | Negative | 415715 - 416212 | 18528.3 |
| hypothetical protein | HOLDEFILI_00460 | Not Available | Positive | 416360 - 416482 | 4544.41 |
| hypothetical protein | HOLDEFILI_00461 | Not Available | Positive | 416511 - 417188 | 25733.9 |
| putative peptidoglycan binding domain protein | HOLDEFILI_00462 | Not Available | Positive | 417185 - 417976 | 29856.2 |
| abc transporter, permease protein | HOLDEFILI_00463 | P31135 | Positive | 418346 - 419176 | 30245.8 |
| spermidine/putrescine abc transporter, permease protein | HOLDEFILI_00464 | Not Available | Positive | 419176 - 419515 | 12232.5 |
| spermidine/putrescine abc transporter, permease family protein | HOLDEFILI_00465 | Not Available | Positive | 419516 - 419953 | 15845.0 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
