Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, family 5 | HOLDEFILI_00446 | P24141 | Positive | 400303 - 401949 | 60639.9 |
| abc transporter, substrate-binding protein, family 5 | HOLDEFILI_00447 | P06202 | Positive | 402185 - 403903 | 64315.6 |
| oligopeptide transport system permease protein oppb | HOLDEFILI_00448 | P24138 | Positive | 404116 - 405039 | 33464.4 |
| oligopeptide abc transporter, permease protein oppc | HOLDEFILI_00449 | P24139 | Positive | 405053 - 405979 | 34065.8 |
| abc transporter, atp-binding protein | HOLDEFILI_00450 | P26905 | Positive | 405993 - 407000 | 37476.5 |
| abc transporter, atp-binding protein | HOLDEFILI_00451 | C0SP98 | Positive | 406997 - 407986 | 36824.9 |
| hypothetical protein | HOLDEFILI_00452 | Not Available | Positive | 408115 - 408771 | 24999.6 |
| hypothetical protein | HOLDEFILI_00453 | Not Available | Positive | 408839 - 409666 | 32425.7 |
| fructose-like phosphotransferase enzyme iib component 2 | HOLDEFILI_00454 | P69810 | Positive | 409835 - 410209 | 13757.6 |
| phosphotransferase system, eiic | HOLDEFILI_00455 | Q8FFD5 | Positive | 410228 - 411310 | 37766.9 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
