Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00406 | Not Available | Negative | 368231 - 368535 | 12192.8 |
| hypothetical protein | HOLDEFILI_00407 | Not Available | Negative | 368536 - 370232 | 65038.9 |
| lema family protein | HOLDEFILI_00408 | A8AVK0 | Negative | 370324 - 370875 | 20791.5 |
| na/pi-cotransporter ii-like protein | HOLDEFILI_00409 | P54463 | Positive | 371350 - 373008 | 60628.9 |
| 4-phosphoerythronate dehydrogenase | HOLDEFILI_00410 | Q2VEQ7 | Positive | 373072 - 374109 | 38733.6 |
| Tmrna,resume consensus sequence (at 75): aataactggaaaatcttt | Not Available | Not Available | Positive | 374157 - 374533 | Not Available |
| ubic transcription regulator-associated domain protein | HOLDEFILI_00412 | Not Available | Positive | 374717 - 375229 | 20097.1 |
| transcriptional regulator, gntr family | HOLDEFILI_00413 | P13669 | Positive | 375226 - 375948 | 27937.8 |
| pts system sorbose-specific iic component | HOLDEFILI_00414 | Not Available | Positive | 376080 - 376850 | 27089.8 |
| pts system mannose/fructose/sorbose family iid component | HOLDEFILI_00415 | Not Available | Positive | 376851 - 377687 | 30689.2 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
