Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate efflux family protein | HOLDEFILI_04178 | Q6GJY2 | Negative | 3725789 - 3727162 | 49144.5 |
| transcriptional regulator, marr family | HOLDEFILI_04179 | Not Available | Negative | 3727159 - 3727605 | 16851.3 |
| adenosine deaminase | HOLDEFILI_04180 | Q7VNV1 | Negative | 3727845 - 3728897 | 39017.4 |
| l-asparaginase, type i | HOLDEFILI_04181 | P26900 | Negative | 3729012 - 3730019 | 36863.6 |
| hypothetical protein | HOLDEFILI_04183 | Not Available | Negative | 3730150 - 3730350 | 7882.71 |
| hypothetical protein | HOLDEFILI_04182 | Not Available | Positive | 3730336 - 3730644 | 11618.7 |
| hypothetical protein | HOLDEFILI_04184 | Not Available | Positive | 3730841 - 3730975 | 4959.17 |
| hypothetical protein | HOLDEFILI_04185 | Not Available | Negative | 3730967 - 3731308 | 12630.4 |
| alpha amylase, catalytic domain protein | HOLDEFILI_04186 | P29094 | Positive | 3731365 - 3733020 | 64424.5 |
| had hydrolase, family ia, variant 3 | HOLDEFILI_04187 | Q9X0Y1 | Negative | 3733179 - 3733844 | 24964.0 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
