Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_04058 | Not Available | Negative | 3629157 - 3629570 | 15400.8 |
| hypothetical protein | HOLDEFILI_04059 | Not Available | Negative | 3629567 - 3630031 | 17836.6 |
| hypothetical protein | HOLDEFILI_04060 | Not Available | Negative | 3630028 - 3630336 | 11275.5 |
| bacterial type ii secretion system domain protein f | HOLDEFILI_04061 | Q1D0A0 | Negative | 3630341 - 3631375 | 37402.6 |
| transglutaminase-like protein | HOLDEFILI_04062 | Not Available | Negative | 3631391 - 3632332 | 35763.3 |
| hypothetical protein | HOLDEFILI_04063 | Not Available | Negative | 3632427 - 3632909 | 17570.7 |
| transcriptional regulatory protein, c-terminal domain protein | HOLDEFILI_04064 | Not Available | Negative | 3632987 - 3634150 | 44777.8 |
| diguanylate cyclase (ggdef) domain protein | HOLDEFILI_04065 | P55552 | Positive | 3634269 - 3635630 | 52913.8 |
| putative small multi-drug export protein | HOLDEFILI_04066 | Not Available | Negative | 3635662 - 3636153 | 17507.3 |
| hypothetical protein | HOLDEFILI_04067 | Not Available | Negative | 3636676 - 3636849 | 6907.52 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
