Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HOLDEFILI_04018 | P94360 | Negative | 3592844 - 3593935 | 40831.6 |
| putative methylmalonate-semialdehyde dehydrogenase (acylating) | HOLDEFILI_04019 | A4IPB2 | Negative | 3594146 - 3595582 | 51131.0 |
| oxidoreductase, nad-binding domain protein | HOLDEFILI_04020 | O05389 | Negative | 3595575 - 3596609 | 37906.3 |
| ap endonuclease, family 2 | HOLDEFILI_04021 | B8F6Y7 | Negative | 3596624 - 3597520 | 33245.9 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | HOLDEFILI_04022 | Q8XP76 | Negative | 3597525 - 3599450 | 70900.8 |
| hypothetical protein | HOLDEFILI_04023 | Not Available | Positive | 3599485 - 3599607 | 4674.29 |
| transcriptional regulator, deor family | HOLDEFILI_04024 | Not Available | Positive | 3599611 - 3600366 | 28564.2 |
| kinase, pfkb family | HOLDEFILI_04025 | P0A9J7 | Negative | 3600390 - 3601325 | 35268.6 |
| family 4 glycosyl hydrolase | HOLDEFILI_04026 | Not Available | Negative | 3601316 - 3602698 | 51782.5 |
| hypothetical protein | HOLDEFILI_04027 | Not Available | Negative | 3602714 - 3603766 | 41025.0 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
