Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding domain protein | HOLDEFILI_03958 | P74892 | Positive | 3543532 - 3544545 | 37685.4 |
| pts system sucrose-specific iibc component | HOLDEFILI_03959 | P22825 | Positive | 3544751 - 3546652 | 66949.1 |
| sucrose-6-phosphate hydrolase | HOLDEFILI_03960 | P07819 | Positive | 3546649 - 3547965 | 49668.5 |
| kinase, pfkb family | HOLDEFILI_03961 | Q9M1B9 | Positive | 3547962 - 3548903 | 34339.9 |
| hypothetical protein | HOLDEFILI_03962 | Not Available | Negative | 3548980 - 3549171 | 7602.85 |
| 23s rrna (uracil-5-)-methyltransferase ruma | HOLDEFILI_03963 | Q9KF10 | Negative | 3549395 - 3550756 | 50414.0 |
| hypothetical protein | HOLDEFILI_03964 | Not Available | Negative | 3550838 - 3551536 | 25429.8 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase, b subunit | HOLDEFILI_03965 | A4IJZ3 | Negative | 3551669 - 3553093 | 53294.4 |
| putative aspartyl/glutamyl-trna(asn/gln) amidotransferase, a subunit | HOLDEFILI_03966 | C4L690 | Negative | 3553093 - 3554517 | 50784.8 |
| putative aspartyl/glutamyl-trna(asn/gln) amidotransferase, c subunit | HOLDEFILI_03967 | Not Available | Negative | 3554519 - 3554750 | 8495.07 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
