Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_03898 | Not Available | Negative | 3489809 - 3490135 | 12354.6 |
| hypothetical protein | HOLDEFILI_03899 | Not Available | Negative | 3490128 - 3491111 | 35275.3 |
| putative peptidoglycan binding domain protein | HOLDEFILI_03900 | Not Available | Positive | 3491260 - 3491739 | 17906.5 |
| transcriptional regulator, marr family | HOLDEFILI_03901 | Not Available | Positive | 3491872 - 3492333 | 17618.0 |
| pyridoxamine 5'-phosphate oxidase family protein | HOLDEFILI_03902 | Not Available | Positive | 3492323 - 3492772 | 16980.2 |
| phospholipase d domain protein | HOLDEFILI_03903 | P34001 | Negative | 3492917 - 3494449 | 58628.8 |
| 5-nitroimidazole antibiotic resistance protein nimb | HOLDEFILI_03904 | Not Available | Negative | 3494582 - 3494986 | 15273.3 |
| hypothetical protein | HOLDEFILI_03905 | Not Available | Negative | 3495027 - 3495224 | 7591.84 |
| hypothetical protein | HOLDEFILI_03906 | Not Available | Negative | 3495283 - 3496443 | 45818.6 |
| putative excinuclease abc, a subunit | HOLDEFILI_03907 | Q6GIN2 | Negative | 3496634 - 3499186 | 92243.0 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
