Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endoribonuclease cas2 | HOLDEFILI_03838 | Q9KFX8 | Negative | 3433771 - 3434061 | 10963.4 |
| crispr-associated endonuclease cas1, dvulg subtype | HOLDEFILI_03839 | Q2RW61 | Negative | 3434071 - 3435102 | 39630.4 |
| crispr-associated protein cas4 | HOLDEFILI_03840 | Not Available | Negative | 3435099 - 3435761 | 25638.8 |
| hypothetical protein | HOLDEFILI_03841 | D4GQN6 | Negative | 3435751 - 3436608 | 31477.3 |
| crispr-associated protein, csd1 family | HOLDEFILI_03842 | Not Available | Negative | 3436613 - 3438499 | 72198.3 |
| crispr-associated protein cas5, dvulg subtype | HOLDEFILI_03843 | Not Available | Negative | 3438500 - 3439156 | 25647.8 |
| crispr-associated endonuclease cas3-hd | HOLDEFILI_03844 | Not Available | Negative | 3439170 - 3441698 | 97616.9 |
| hypothetical protein | HOLDEFILI_03845 | Not Available | Negative | 3442031 - 3442168 | 5235.33 |
| hypothetical protein | HOLDEFILI_03846 | Not Available | Positive | 3442349 - 3442468 | 4623.54 |
| hemn domain protein | HOLDEFILI_03847 | Not Available | Negative | 3442778 - 3443860 | 41008.2 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
