Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00366 | Not Available | Positive | 331972 - 332454 | 18338.3 |
| hypothetical protein | HOLDEFILI_00368 | Not Available | Negative | 332500 - 332649 | 5434.64 |
| hypothetical protein | HOLDEFILI_00367 | Not Available | Positive | 332632 - 332835 | 7786.33 |
| isoamylase n-terminal domain protein | HOLDEFILI_00369 | P30538 | Positive | 332866 - 333319 | 17392.2 |
| hypothetical protein | HOLDEFILI_00370 | Not Available | Negative | 333320 - 333541 | 7882.14 |
| pts system sorbose subfamily iib component | HOLDEFILI_00371 | Not Available | Negative | 333554 - 334042 | 18694.0 |
| transcriptional regulator, rpir family | HOLDEFILI_00372 | Q97MK5 | Positive | 334377 - 335201 | 30986.2 |
| hypothetical protein | HOLDEFILI_00373 | Not Available | Positive | 335243 - 335425 | 6990.56 |
| hypothetical protein | HOLDEFILI_00374 | Not Available | Negative | 335621 - 335879 | 9612.85 |
| 1,4-alpha-glucan branching enzyme | HOLDEFILI_00375 | C3PCL8 | Positive | 335880 - 337386 | 58713.4 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
