Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_03768 | Not Available | Negative | 3374596 - 3374768 | 6622.87 |
| 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family | HOLDEFILI_03769 | O05650 | Positive | 3374806 - 3375900 | 39749.7 |
| pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine dip-binding domain protein | HOLDEFILI_03770 | Not Available | Positive | 3375897 - 3376771 | 32289.7 |
| hypothetical protein | HOLDEFILI_03771 | Q57714 | Positive | 3376772 - 3378093 | 48254.1 |
| dutp diphosphatase | HOLDEFILI_03772 | Q9CJ30 | Negative | 3378338 - 3378853 | 18901.2 |
| transposase, is605 orfb family | HOLDEFILI_03773 | Not Available | Negative | 3379071 - 3380177 | 42895.2 |
| Trna-ser | Not Available | Not Available | Positive | 3380392 - 3380482 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3380515 - 3380590 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3380596 - 3380669 | Not Available |
| hypothetical protein | HOLDEFILI_03777 | Not Available | Negative | 3380745 - 3380924 | 6300.74 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
