Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase | HOLDEFILI_03697 | P39793 | Negative | 3305793 - 3307184 | 50988.9 |
| recombination protein u | HOLDEFILI_03698 | Q9KC71 | Negative | 3307188 - 3307544 | 13988.8 |
| diviva domain protein | HOLDEFILI_03699 | Q03MI1 | Positive | 3307625 - 3307954 | 12841.2 |
| hypothetical protein | HOLDEFILI_03701 | Not Available | Positive | 3308379 - 3308549 | 6433.65 |
| hypothetical protein | HOLDEFILI_03702 | Not Available | Positive | 3308651 - 3309532 | 32881.2 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | HOLDEFILI_03703 | P46322 | Positive | 3309563 - 3310129 | 20917.5 |
| competence/damage-inducible domain protein cina | HOLDEFILI_03704 | Q9EXC9 | Positive | 3310204 - 3310596 | 14224.2 |
| reca protein | HOLDEFILI_03705 | Q9KAA7 | Positive | 3310652 - 3311683 | 37084.6 |
| ymda/ytgf family protein | HOLDEFILI_03706 | Q49X74 | Positive | 3311922 - 3313478 | 58029.9 |
| putative metallophosphoesterase | HOLDEFILI_03707 | O31775 | Positive | 3313478 - 3314248 | 28613.9 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
