Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome segregation protein smc | HOLDEFILI_03576 | P41508 | Positive | 3204396 - 3207335 | 111054.0 |
| signal recognition particle-docking protein ftsy | HOLDEFILI_03578 | P51835 | Positive | 3207332 - 3208303 | 35747.4 |
| helix-turn-helix protein, ylxm/p13 family | HOLDEFILI_03579 | Q834F4 | Positive | 3208293 - 3208619 | 12869.4 |
| acetate kinase | HOLDEFILI_03580 | Q5KW66 | Positive | 3208620 - 3209828 | 44021.2 |
| dhha1 domain protein | HOLDEFILI_03581 | P75229 | Positive | 3209831 - 3210784 | 36115.5 |
| hypothetical protein | HOLDEFILI_03582 | Not Available | Positive | 3210781 - 3211151 | 13997.6 |
| hypothetical protein | HOLDEFILI_03583 | Not Available | Positive | 3211152 - 3212428 | 47395.6 |
| dna-binding protein hu | HOLDEFILI_03584 | Q5HFV0 | Positive | 3212524 - 3212808 | 10023.3 |
| putative neutral zinc metallopeptidase | HOLDEFILI_03585 | O05248 | Positive | 3213060 - 3213737 | 25045.7 |
| hypothetical protein | HOLDEFILI_03586 | Not Available | Positive | 3213879 - 3214346 | 17603.9 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
