Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_03467 | Not Available | Positive | 3111794 - 3111931 | 5606.18 |
| hypothetical protein | HOLDEFILI_03468 | Not Available | Positive | 3111988 - 3112863 | 32527.2 |
| hypothetical protein | HOLDEFILI_03469 | Not Available | Positive | 3112832 - 3113179 | 12578.7 |
| abc transporter, atp-binding protein | HOLDEFILI_03470 | O06476 | Positive | 3113198 - 3114937 | 65611.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HOLDEFILI_03471 | Q0TTB4 | Positive | 3115283 - 3116005 | 27421.9 |
| amidophosphoribosyltransferase | HOLDEFILI_03472 | P00497 | Positive | 3116002 - 3117405 | 51550.8 |
| adenylosuccinate lyase | HOLDEFILI_03473 | P72478 | Positive | 3117450 - 3118718 | 48677.0 |
| hypothetical protein | HOLDEFILI_03474 | Not Available | Positive | 3118985 - 3119281 | 10827.3 |
| collagen triple helix repeat protein | HOLDEFILI_03475 | Not Available | Positive | 3119353 - 3119704 | 10528.2 |
| collagen triple helix repeat protein | HOLDEFILI_03476 | Not Available | Positive | 3119705 - 3120813 | 34036.4 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
