Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dak2 domain fusion protein ylov | HOLDEFILI_03407 | O34751 | Positive | 3058356 - 3059830 | 53389.1 |
| hypothetical protein | HOLDEFILI_03408 | Not Available | Positive | 3059831 - 3059992 | 5725.44 |
| hypothetical protein | HOLDEFILI_03409 | Not Available | Negative | 3059965 - 3060111 | 5734.04 |
| hypothetical protein | HOLDEFILI_03410 | Not Available | Positive | 3060117 - 3060272 | 6114.44 |
| hypothetical protein | HOLDEFILI_03411 | Not Available | Positive | 3060350 - 3061168 | 31615.3 |
| hypothetical protein | HOLDEFILI_03412 | Not Available | Negative | 3061217 - 3061357 | 5544.73 |
| tat pathway signal sequence domain protein | HOLDEFILI_03413 | Not Available | Positive | 3061466 - 3063172 | 61419.1 |
| hypothetical protein | HOLDEFILI_03414 | Not Available | Positive | 3063234 - 3063377 | 5061.25 |
| putative atp-dependent dna helicase recg | HOLDEFILI_03415 | O34942 | Positive | 3063426 - 3065444 | 75516.2 |
| ribonuclease iii | HOLDEFILI_03416 | B7IUK8 | Positive | 3065487 - 3066230 | 28240.9 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
