Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase, family ia, variant 3 | HOLDEFILI_03387 | P77247 | Positive | 3041753 - 3042412 | 24265.3 |
| phosphoglycerate mutase family protein | HOLDEFILI_03388 | Not Available | Positive | 3042409 - 3042948 | 20226.1 |
| putative topology modulation protein | HOLDEFILI_03389 | Not Available | Positive | 3042965 - 3043474 | 19641.8 |
| acetyltransferase, gnat family | HOLDEFILI_03390 | Not Available | Positive | 3043600 - 3044118 | 19763.5 |
| hypothetical protein | HOLDEFILI_03391 | Not Available | Negative | 3044300 - 3045500 | 45241.1 |
| hypothetical protein | HOLDEFILI_03392 | Not Available | Negative | 3045569 - 3045745 | 6906.69 |
| hypothetical protein | HOLDEFILI_03393 | Not Available | Positive | 3045746 - 3047245 | 55391.3 |
| uridine phosphorylase | HOLDEFILI_03394 | O83990 | Negative | 3047397 - 3048212 | 29196.9 |
| hypothetical protein | HOLDEFILI_03395 | Not Available | Negative | 3048283 - 3049362 | 39062.8 |
| hypothetical protein | HOLDEFILI_03396 | Not Available | Negative | 3049371 - 3050477 | 39844.3 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
