Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein | HOLDEFILI_00317 | Not Available | Negative | 291391 - 292290 | 33248.2 |
| hypothetical protein | HOLDEFILI_00316 | Not Available | Positive | 292271 - 292402 | 4910.0 |
| peptidase, s41 family | HOLDEFILI_00318 | Q49XN1 | Positive | 292442 - 294073 | 60234.0 |
| excinuclease abc, b subunit | HOLDEFILI_00319 | Q5KVB5 | Positive | 294063 - 296042 | 75828.9 |
| hypothetical protein | HOLDEFILI_00320 | Not Available | Positive | 296053 - 296193 | 5118.36 |
| flavodoxin-like protein | HOLDEFILI_00321 | P45245 | Positive | 296282 - 297157 | 32523.9 |
| pasta domain protein | HOLDEFILI_00322 | Not Available | Positive | 297183 - 298949 | 64804.0 |
| efflux abc transporter, permease protein | HOLDEFILI_00323 | Not Available | Positive | 299006 - 300607 | 61033.8 |
| hypothetical protein | HOLDEFILI_00324 | Not Available | Positive | 300622 - 301038 | 15826.0 |
| hypothetical protein | HOLDEFILI_00325 | Not Available | Positive | 301039 - 301187 | 5484.67 |
Pathways
377 pathways
Health Effects
No health effects information available for this bacterium.
