Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HOLDEFILI_00276 | Not Available | Positive | 252014 - 252484 | 17212.9 |
| aldose 1-epimerase | HOLDEFILI_00277 | Not Available | Positive | 252481 - 253263 | 29597.2 |
| lysr substrate binding domain protein | HOLDEFILI_00278 | Not Available | Negative | 253401 - 254306 | 34882.6 |
| f5/8 type c domain protein | HOLDEFILI_00279 | Not Available | Positive | 254473 - 256443 | 71695.9 |
| lysr substrate binding domain protein | HOLDEFILI_00280 | P42722 | Negative | 256585 - 257526 | 36128.6 |
| mate efflux family protein | HOLDEFILI_00281 | Q2FJS9 | Positive | 257652 - 258987 | 47972.8 |
| hth domain protein | HOLDEFILI_00282 | Not Available | Positive | 259030 - 261033 | 77438.5 |
| pts system sorbose subfamily iib component | HOLDEFILI_00283 | Not Available | Positive | 261278 - 261769 | 18015.9 |
| pts system sorbose-specific iic component | HOLDEFILI_00284 | Not Available | Positive | 261821 - 262592 | 26788.2 |
| pts system mannose/fructose/sorbose family iid component | HOLDEFILI_00285 | Not Available | Positive | 262592 - 263407 | 29020.3 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
