Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavocytochrome c | HOLDEFILI_00166 | P83223 | Negative | 153245 - 154651 | 49902.8 |
| hypothetical protein | HOLDEFILI_00167 | Not Available | Positive | 154700 - 154822 | 4853.89 |
| hypothetical protein | HOLDEFILI_00168 | Not Available | Positive | 154788 - 156020 | 46328.4 |
| hypothetical protein | HOLDEFILI_00169 | Not Available | Negative | 156014 - 156142 | 4873.71 |
| hypothetical protein | HOLDEFILI_00170 | Not Available | Negative | 156148 - 156414 | 10300.0 |
| dna-binding helix-turn-helix protein | HOLDEFILI_00171 | Not Available | Negative | 156401 - 158497 | 74205.0 |
| hypothetical protein | HOLDEFILI_00172 | Not Available | Positive | 158587 - 158733 | 5313.57 |
| glyceraldehyde-3-phosphate dehydrogenase, type i | HOLDEFILI_00173 | Q59309 | Negative | 158711 - 159721 | 35807.9 |
| endopeptidase clp | HOLDEFILI_00174 | Q837R0 | Positive | 159876 - 160457 | 21103.5 |
| diguanylate cyclase (ggdef) domain protein | HOLDEFILI_00175 | Not Available | Positive | 160795 - 165447 | 178213.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
