Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HOLDEFILI_00107 | Not Available | Negative | 94713 - 94847 | 5260.29 |
| fad binding domain protein | HOLDEFILI_00108 | Not Available | Negative | 94933 - 96873 | 69410.9 |
| hypothetical protein | HOLDEFILI_00109 | Not Available | Positive | 97217 - 97819 | 22364.9 |
| transcriptional regulator, marr family | HOLDEFILI_00110 | Not Available | Negative | 98011 - 98493 | 18789.8 |
| ser/thr phosphatase family protein | HOLDEFILI_00111 | Not Available | Negative | 98596 - 99435 | 31517.6 |
| glu/leu/phe/val dehydrogenase, dimerization domain protein | HOLDEFILI_00112 | P31026 | Negative | 99549 - 100985 | 52811.5 |
| dna-directed rna polymerase, beta' subunit | HOLDEFILI_00113 | Q5L404 | Negative | 100987 - 104784 | 141066.0 |
| dna-directed rna polymerase, beta subunit | HOLDEFILI_00114 | A8F976 | Negative | 104799 - 108947 | 154514.0 |
| methyltransferase small domain protein | HOLDEFILI_00115 | P37872 | Negative | 109048 - 109659 | 22782.6 |
| ribosomal protein l7/l12 | HOLDEFILI_00116 | Q5WLS2 | Negative | 109718 - 110089 | 12840.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
