Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, beta subunit | HOLDEFILI_01087 | P05649 | Negative | 976025 - 977146 | 41115.2 |
| chromosomal replication initiator protein dnaa | HOLDEFILI_01088 | A0Q3U6 | Negative | 977293 - 978669 | 51893.3 |
| hypothetical protein | HOLDEFILI_01089 | Not Available | Positive | 979018 - 979170 | 5988.18 |
| had hydrolase, family iib | HOLDEFILI_01090 | Not Available | Positive | 979181 - 980014 | 31559.4 |
| serine-type d-ala-d-ala carboxypeptidase | HOLDEFILI_01091 | O34866 | Positive | 980008 - 980781 | 28632.5 |
| cof-like hydrolase | HOLDEFILI_01092 | Not Available | Positive | 980833 - 981648 | 30468.6 |
| hypothetical protein | HOLDEFILI_01093 | Not Available | Positive | 981650 - 981829 | 7062.34 |
| diguanylate cyclase (ggdef) domain protein | HOLDEFILI_01094 | O34325 | Negative | 981886 - 983763 | 70229.8 |
| hypothetical protein | HOLDEFILI_01095 | Not Available | Negative | 984026 - 984154 | 4940.01 |
| ribonuclease p protein component | HOLDEFILI_01096 | Q6F0D5 | Positive | 984456 - 984794 | 13321.5 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
