Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prd domain protein | HOLDEFILI_00097 | Not Available | Positive | 85801 - 87699 | 72334.6 |
| hypothetical protein | HOLDEFILI_00098 | Not Available | Positive | 87712 - 88347 | 23856.6 |
| hypothetical protein | HOLDEFILI_00099 | Not Available | Negative | 88405 - 88539 | 5336.42 |
| hypothetical protein | HOLDEFILI_00100 | Not Available | Negative | 88532 - 89290 | 29305.2 |
| hypothetical protein | HOLDEFILI_00101 | Not Available | Negative | 89295 - 89474 | 7031.55 |
| kinase, pfkb family | HOLDEFILI_00102 | Q53W83 | Negative | 89631 - 90653 | 36898.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | HOLDEFILI_00103 | O83578 | Negative | 90675 - 91673 | 36107.8 |
| yheo-like protein | HOLDEFILI_00104 | Not Available | Positive | 91835 - 92488 | 24880.7 |
| trna nucleotidyltransferase/poly(a) polymerase family protein | HOLDEFILI_00105 | Q8EQD6 | Positive | 92485 - 93735 | 47548.4 |
| ap endonuclease, family 2 | HOLDEFILI_00106 | Q58707 | Negative | 93806 - 94708 | 34550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
