Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase family protein | HOLDEFILI_01037 | Not Available | Negative | 929434 - 929874 | 16488.8 |
| hypothetical protein | HOLDEFILI_01038 | Not Available | Negative | 929891 - 930040 | 5700.08 |
| hypothetical protein | HOLDEFILI_01039 | Not Available | Negative | 930060 - 930596 | 19570.2 |
| hypothetical protein | HOLDEFILI_01040 | Not Available | Negative | 930616 - 930759 | 5654.78 |
| dna-binding helix-turn-helix protein | HOLDEFILI_01041 | Not Available | Negative | 930798 - 931859 | 40113.2 |
| response regulator receiver domain protein | HOLDEFILI_01042 | Not Available | Negative | 932072 - 932848 | 28829.5 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | HOLDEFILI_01043 | Not Available | Negative | 932811 - 935615 | 103740.0 |
| k+-transporting atpase, c subunit | HOLDEFILI_01044 | A5N884 | Negative | 935653 - 936276 | 22284.8 |
| k+-transporting atpase, b subunit | HOLDEFILI_01045 | O32328 | Negative | 936288 - 938339 | 72695.3 |
| k+-transporting atpase, a subunit | HOLDEFILI_01046 | O32327 | Negative | 938350 - 940092 | 62583.6 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
