Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative l-ribulose-5-phosphate 4-epimerase | HOLDEFILI_00987 | Q9S469 | Negative | 886921 - 887556 | 23245.1 |
| epimerase | HOLDEFILI_00988 | P39362 | Negative | 887565 - 888194 | 24092.1 |
| hypothetical protein | HOLDEFILI_00989 | B1LQL2 | Positive | 888360 - 889466 | 41970.9 |
| l-ribulose-5-phosphate 3-epimerase | HOLDEFILI_00990 | B1LQL7 | Positive | 889508 - 890353 | 32005.5 |
| orotidine 5'-phosphate decarboxylase/humps family | HOLDEFILI_00991 | P37678 | Positive | 890350 - 891000 | 23825.9 |
| transcriptional regulator, deor family | HOLDEFILI_00992 | Not Available | Negative | 891165 - 891950 | 29480.7 |
| hypothetical protein | HOLDEFILI_00993 | Not Available | Negative | 891947 - 892675 | 28136.7 |
| putative sgc region protein sgcq | HOLDEFILI_00994 | P39364 | Positive | 892878 - 893693 | 29831.1 |
| ketose-bisphosphate aldolase | HOLDEFILI_00995 | Q703I2 | Negative | 893801 - 894643 | 30011.1 |
| hydrolase, alpha/beta domain protein | HOLDEFILI_00996 | Not Available | Negative | 894827 - 895921 | 41375.6 |
Pathways
252 pathways
Health Effects
No health effects information available for this bacterium.
