Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemania
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemania |
| Species | Holdemania filiformis |
| Strain | DSM 12042 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954491 bp
Thymine Count
940345 bp
Guanine Count
960613 bp
Cytosine Count
948296 bp
Genome Length
3803745 bp
Protein-coding Genes
4223 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, merr family | HOLDEFILI_00087 | Not Available | Negative | 77874 - 78674 | 31357.9 |
| tat pathway signal sequence domain protein | HOLDEFILI_00088 | P71864 | Negative | 78797 - 80476 | 60829.8 |
| hypothetical protein | HOLDEFILI_00089 | Not Available | Negative | 80693 - 81149 | 16394.5 |
| hypothetical protein | HOLDEFILI_00090 | Not Available | Negative | 81150 - 81399 | 8963.52 |
| hypothetical protein | HOLDEFILI_00091 | Not Available | Negative | 81393 - 82004 | 21028.1 |
| glycosyl hydrolase, family 1 | HOLDEFILI_00093 | Not Available | Negative | 81988 - 83448 | 56043.2 |
| hypothetical protein | HOLDEFILI_00092 | Not Available | Positive | 83422 - 83544 | 4936.13 |
| pts system, lactose/cellobiose specific iia subunit | HOLDEFILI_00094 | Q5HM39 | Negative | 83587 - 83901 | 11665.8 |
| pts system, lactose/cellobiose family iic component | HOLDEFILI_00095 | Not Available | Negative | 83925 - 85280 | 49388.9 |
| lichenan-specific phosphotransferase enzyme iib component | HOLDEFILI_00096 | Not Available | Negative | 85305 - 85619 | 11682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
