Segatella copri DSM 18205

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri DSM 18205 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genetic architecture. The complete genome sequence of Segatella copri is available under the accession ACBX00000000.2. As an anaerobe, Segatella copri thrives in environments devoid of oxygen, suggesting it may inhabit specific ecological niches such as the gastrointestinal tracts of animals or other anoxic environments. The anaerobic lifestyle of this bacterium could play a significant role in its interactions within the microbiome, particularly in nutrient cycling and maintaining the balance of microbial communities. The unique traits of Segatella copri highlight its potential importance in understanding microbial ecology and the role of anaerobic bacteria in various ecosystems. Further research on this organism may provide insights into its contributions to gut health and disease, as well as its possible applications in biotechnology or medicine.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainDSM 18205

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Segatella copri DSM 18205 P_copri-1.0.1_Cont26.1, whole genome

Gene Summary

Adenine Count

976377 bp

Thymine Count

958082 bp

Guanine Count

771364 bp

Cytosine Count

802050 bp

Genome Length

3507873 bp

Protein-coding Genes

3337 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl hydrolase, family 57PREVCOP_03564Not AvailablePositive59394 - 6082754408.6
glycosyl hydrolase, family 43PREVCOP_03565Not AvailableNegative60940 - 6273067458.8
endo-polygalacturonase domain proteinPREVCOP_03566Not AvailableNegative62752 - 6473772348.3
susd family proteinPREVCOP_03567Not AvailableNegative64980 - 6668963345.8
tonb-linked outer membrane protein, susc/raga familyPREVCOP_03568Not AvailableNegative66714 - 69989121896.0
hypothetical proteinPREVCOP_03569Not AvailableNegative71320 - 7175717026.9
hypothetical proteinPREVCOP_03570Not AvailableNegative71829 - 7342758749.1
susd family proteinPREVCOP_03571Not AvailableNegative73492 - 7542972632.1
tonb-linked outer membrane protein, susc/raga familyPREVCOP_03572Not AvailableNegative75448 - 78684118280.0
hypothetical proteinPREVCOP_03573Not AvailableNegative78782 - 789918035.82

Displaying genes 71 – 80 of 3411 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.