Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Segatella |
| Species | Segatella copri |
| Strain | DSM 18205 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
976377 bp
Thymine Count
958082 bp
Guanine Count
771364 bp
Cytosine Count
802050 bp
Genome Length
3507873 bp
Protein-coding Genes
3337 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | PREVCOP_03721 | Not Available | Negative | 246598 - 247755 | 42663.2 |
| amino acid kinase family | PREVCOP_03722 | Not Available | Negative | 247871 - 249193 | 49147.9 |
| abc transporter, atp-binding protein | PREVCOP_03723 | Not Available | Negative | 249221 - 250069 | 32043.8 |
| phosphoribosyl-atp diphosphatase | PREVCOP_03724 | Not Available | Negative | 250091 - 250738 | 24468.3 |
| imidazoleglycerol phosphate synthase, cyclase subunit | PREVCOP_03725 | Not Available | Negative | 250783 - 251565 | 28096.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | PREVCOP_03726 | Not Available | Negative | 251579 - 252304 | 26406.9 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | PREVCOP_03727 | Not Available | Negative | 252321 - 252959 | 24113.8 |
| hypothetical protein | PREVCOP_03728 | Not Available | Positive | 252996 - 253115 | 4880.18 |
| fha domain protein | PREVCOP_03729 | Not Available | Negative | 253189 - 253725 | 20138.1 |
| sporulation and cell division repeat protein | PREVCOP_03730 | Not Available | Negative | 253832 - 254980 | 42535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
