Corynebacterium amycolatum SK46

microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium amycolatum SK46 is a microaerophilic bacterium, indicating that it requires reduced levels of oxygen for optimal growth. This organism thrives at an optimal temperature of 29°C, placing it within the mesophilic range, which is typically between 20°C and 45°C. It possesses a single replicon, which is characteristic of many prokaryotic organisms and suggests a streamlined genomic organization. The strain is cataloged under the accession number ABZU00000000.1, providing a unique identifier for genetic and taxonomic studies. The combination of its microaerophilic nature and mesophilic temperature preference suggests that C. amycolatum SK46 may inhabit environments where oxygen levels are low, such as certain human-associated niches or specific soil conditions. Biologically, the adaptability of C. amycolatum SK46 to microaerophilic conditions and its preference for moderate temperatures may reflect a role in various ecological niches, particularly where organic matter is present and oxygen is limited. Such traits may also have implications for its interactions with other microorganisms in its habitat, contributing to the complex dynamics of microbial communities. Understanding the specific ecological roles and interactions of C. amycolatum SK46 could provide insights into its potential applications in biotechnology or medical microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium amycolatum
StrainSK46

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium amycolatum SK46
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium amycolatum SK46 contig00023, whole genome shotgun

Gene Summary

Adenine Count

528514 bp

Thymine Count

512665 bp

Guanine Count

710376 bp

Cytosine Count

762356 bp

Genome Length

2513912 bp

Protein-coding Genes

2103 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCORAM0001_0555Not AvailablePositive389301 - 39016130747.2
hypothetical proteinCORAM0001_0554Not AvailablePositive390158 - 39200560979.3
transporter, major facilitator family proteinCORAM0001_0553Not AvailablePositive392218 - 39371451926.4
transcriptional regulator, tetr familyCORAM0001_0552Not AvailablePositive393701 - 39424620329.2
hypothetical proteinCORAM0001_0551Not AvailableNegative394253 - 39545541558.1
nad(p)(+) transhydrogenase (ab-specific), alpha subunitCORAM0001_0550Not AvailablePositive395729 - 39742058789.3
nad(p) transhydrogenase beta subunitCORAM0001_0549Not AvailablePositive397427 - 39890251081.5
acetyltransferase, gnat familyCORAM0001_0548Not AvailableNegative398937 - 39944018448.8
lamb/ycsf family proteinCORAM0001_0545Not AvailableNegative401106 - 40187926919.1
hypothetical proteinCORAM0001_0544Not AvailableNegative401970 - 40318141179.3

Displaying genes 341 – 350 of 2157 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

432 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001593L-xylo-hex-3-ulonolactoneC6H8O6Chemical structure of L-xylo-hex-3-ulonolactoneNot available
Average176.1241Da
Monoisotopic176.032087988Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 432 metabolites

Health Effects

No health effects information available for this bacterium.