Methanobrevibacter smithii DSM 2375

Gram-positiveRodNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobrevibacter

Description

Methanobrevibacter smithii DSM 2375 is a Gram-positive, rod-shaped archaeon characterized as a lithotroph and an anaerobe. This organism is known to thrive in multiple habitats, primarily within the human gastrointestinal tract, where it plays a crucial role in the digestion of complex carbohydrates. M. smithii typically arranges itself in pairs or chains, reflecting its unique cellular organization. This species has a mesophilic temperature range, with an optimal growth temperature of 37°C, which aligns with the human body temperature, further supporting its ecological niche. M. smithii possesses a single membrane and a single replicon, indicating a relatively simple cellular structure compared to more complex microorganisms. As a free-living organism, M. smithii contributes significantly to the microbial composition of the gut microbiome. Its ability to utilize carbon dioxide and hydrogen to produce methane positions it as a key player in the methanogenic processes that occur in anaerobic environments. This production of methane not only aids in the digestion process but also influences the overall metabolic activity of the gut microbiota. The presence of M. smithii in the human gut is essential for maintaining gut health and metabolic balance, as it helps in the breakdown of indigestible polysaccharides, thus facilitating energy extraction from otherwise inaccessible food sources. Understanding the roles of M. smithii can provide insights into the intricate relationships within the gut microbiome and its impact on human health.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobrevibacter
SpeciesMethanobrevibacter smithii
StrainDSM 2375

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Chains
SporulationNot Available
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanobrevibacter smithii DSM 2375 M_smithiDSM2375-1.0_Cont56.1,

Gene Summary

Adenine Count

584061 bp

Thymine Count

587532 bp

Guanine Count

263418 bp

Cytosine Count

269854 bp

Genome Length

1704865 bp

Protein-coding Genes

1709 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal proteins l2, rna binding domain proteinMETSMIALI_00667Not AvailableNegative636235 - 63696026301.7
archaeal ribosomal protein l23METSMIALI_00668Not AvailableNegative636973 - 6372339908.09
50s ribosomal protein l4pMETSMIALI_00669Not AvailableNegative637258 - 63802227973.7
archaeal ribosomal protein l3METSMIALI_00670Not AvailableNegative638025 - 63903536996.9
hypothetical proteinMETSMIALI_00671Not AvailableNegative639373 - 64020031367.7
hypothetical proteinMETSMIALI_00672Not AvailableNegative640419 - 64103322863.5
acetyl-coa carboxylase, biotin carboxylase subunitMETSMIALI_00673Not AvailablePositive641104 - 64259754929.5
biotin--[acetyl-coa-carboxylase] ligaseMETSMIALI_00674Not AvailablePositive642614 - 64353134404.5
pyridoxal phosphate enzyme, mj0158 familyMETSMIALI_00675Not AvailableNegative643521 - 64467542383.9
hypothetical proteinMETSMIALI_00676Not AvailableNegative644676 - 64500212637.9

Displaying genes 671 – 680 of 1746 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.