Methanobrevibacter smithii DSM 2375

Gram-positiveRodNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobrevibacter

Description

Methanobrevibacter smithii DSM 2375 is a Gram-positive, rod-shaped archaeon that typically arranges itself in pairs or chains. This organism thrives as a strict anaerobe, indicating that it does not require oxygen for growth and is likely to inhabit environments where oxygen is absent. Optimal growth occurs at 37.0°C, suggesting an adaptation to the human body temperature, which may align with its presence in various human-associated habitats. As a lithotroph, M. smithii derives energy from inorganic compounds, contributing to its role in biogeochemical cycles, particularly in methanogenesis. Its metabolic processes are integral to the degradation of organic matter in anaerobic environments, reflecting its ecological significance in both gastrointestinal ecosystems and other anaerobic niches. The presence of M. smithii in the human gut microbiome highlights its potential role in influencing host metabolism, particularly in relation to energy harvest from indigestible carbohydrates. This organism may also be involved in the production of methane, a byproduct of its metabolic activity, which can have implications for both human health and environmental processes. The adaptability of M. smithii to various anaerobic habitats underscores its importance within microbial communities, particularly in the context of nutrient cycling and energy flow in anaerobic ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobrevibacter
SpeciesMethanobrevibacter smithii
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Chains
SporulationNot Available
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanobrevibacter smithii DSM 2375


Gene Summary

Adenine Count

584061 bp

Thymine Count

587532 bp

Guanine Count

263418 bp

Cytosine Count

269854 bp

Genome Length

1704865 bp

Protein-coding Genes

1709 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rnaNot AvailableNot Available+1 - 2885Not Available
16s ribosomal rnaNot AvailableNot Available+50 - 1525Not Available
isopropylmalate/citramalate/homocitrate synthaseMETSMIALI_00001Not Available+450 - 192253321.8
hypothetical proteinMETSMIALI_00002Not Available+1932 - 242018317.3
hypothetical proteinMETSMIALI_00003Not Available-2404 - 337836152.1
hypothetical proteinMETSMIALI_00004Not Available-3386 - 456144867.2
gmp synthase (glutamine-hydrolyzing) domain proteinMETSMIALI_00005Not Available-4649 - 558734762.8
hypothetical proteinMETSMIALI_00006Not Available-5594 - 588711093.2
gmp synthase (glutamine-hydrolyzing) domain proteinMETSMIALI_00007Not Available-5853 - 642521329.3
hypothetical proteinMETSMIALI_00008Not Available-6761 - 724918480.8

Displaying genes 1 – 10 of 1746 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites