Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | EUBIFOR_00569 | Not Available | Negative | 563021 - 563638 | 23515.1 |
| putative bacteriocin export abc transporter, lactococcin 972 group | EUBIFOR_00570 | Not Available | Negative | 563631 - 564413 | 29086.2 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | EUBIFOR_00571 | Not Available | Negative | 564490 - 565479 | 38443.0 |
| response regulator receiver domain protein | EUBIFOR_00572 | Not Available | Negative | 565476 - 566171 | 26909.6 |
| hypothetical protein | EUBIFOR_00573 | Not Available | Positive | 566228 - 566350 | 4745.14 |
| ser/thr phosphatase family protein | EUBIFOR_00574 | Not Available | Positive | 566509 - 567234 | 28184.7 |
| crispr-associated protein cas2 | EUBIFOR_00575 | Not Available | Negative | 568482 - 568745 | 10317.6 |
| crispr-associated endonuclease cas1 | EUBIFOR_00576 | Not Available | Negative | 568750 - 569739 | 39027.7 |
| crispr-associated endoribonuclease cas6 | EUBIFOR_00577 | Not Available | Negative | 569714 - 570463 | 29359.4 |
| hypothetical protein | EUBIFOR_00578 | Not Available | Negative | 570432 - 571193 | 29545.7 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
