Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase, type i | EUBIFOR_00479 | Not Available | Negative | 477980 - 478741 | 27752.6 |
| trap transporter solute receptor, dctp family | EUBIFOR_00480 | Not Available | Negative | 478747 - 479766 | 38653.9 |
| trap transporter, dctm subunit | EUBIFOR_00481 | Not Available | Negative | 479776 - 481068 | 45901.7 |
| trap transporter, dctq-like membrane protein | EUBIFOR_00482 | Not Available | Negative | 481068 - 481592 | 20515.9 |
| transporter, major facilitator family protein | EUBIFOR_00483 | Not Available | Negative | 481661 - 482866 | 42464.0 |
| shikimate dehydrogenase | EUBIFOR_00484 | Not Available | Negative | 482896 - 483768 | 31742.3 |
| pyridine nucleotide-disulfide oxidoreductase | EUBIFOR_00485 | Not Available | Negative | 483792 - 485789 | 73461.5 |
| lysr substrate binding domain protein | EUBIFOR_00486 | Not Available | Positive | 485927 - 486814 | 34261.2 |
| hypothetical protein | EUBIFOR_00487 | Not Available | Negative | 487168 - 487431 | 10183.9 |
| hypothetical protein | EUBIFOR_00488 | Not Available | Negative | 487538 - 487972 | 16787.3 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
