Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system, mannose/fructose/sorbose family, iid component | EUBIFOR_00429 | Not Available | Negative | 428887 - 429705 | 29975.1 |
| pts system sorbose-specific iic component | EUBIFOR_00430 | Not Available | Negative | 429692 - 430468 | 26532.3 |
| pts system sorbose subfamily iib component | EUBIFOR_00431 | Not Available | Negative | 430479 - 430946 | 16948.8 |
| pts system fructose iia component | EUBIFOR_00432 | Not Available | Negative | 430962 - 431375 | 14850.8 |
| sigma-54 interaction domain protein | EUBIFOR_00433 | Not Available | Negative | 431477 - 434233 | 105711.0 |
| putative rna polymerase sigma-54 factor | EUBIFOR_00434 | Not Available | Positive | 434234 - 435454 | 47340.1 |
| mate efflux family protein | EUBIFOR_00435 | Not Available | Negative | 435680 - 437155 | 53946.4 |
| metal cation transporter, zip family | EUBIFOR_00436 | Not Available | Negative | 437119 - 437877 | 27339.6 |
| serine-type d-ala-d-ala carboxypeptidase | EUBIFOR_00437 | Not Available | Negative | 437908 - 439098 | 45490.1 |
| hypothetical protein | EUBIFOR_00438 | Not Available | Positive | 439207 - 439481 | 10107.0 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
