Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system, mannose/fructose/sorbose family, iib component | EUBIFOR_00029 | Not Available | Positive | 27387 - 27863 | 17411.2 |
| pts system sorbose-specific iic component | EUBIFOR_00030 | Not Available | Positive | 27887 - 28678 | 27067.9 |
| pts system mannose/fructose/sorbose family iid component | EUBIFOR_00031 | Not Available | Positive | 28668 - 29543 | 31897.6 |
| hypothetical protein | EUBIFOR_00032 | Not Available | Positive | 29687 - 30268 | 23022.6 |
| hypothetical protein | EUBIFOR_00033 | Not Available | Positive | 30278 - 30826 | 21216.5 |
| tagatose-6-phosphate kinase | EUBIFOR_00034 | Not Available | Negative | 30895 - 32220 | 49432.4 |
| glucosamine-6-phosphate deaminase | EUBIFOR_00035 | Not Available | Positive | 32395 - 33129 | 26954.0 |
| sortase, srtb family | EUBIFOR_00036 | Not Available | Positive | 33199 - 33948 | 29041.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | EUBIFOR_00037 | Not Available | Positive | 33945 - 35060 | 40983.1 |
| udp-n-acetylmuramate dehydrogenase | EUBIFOR_00038 | Not Available | Positive | 35062 - 35961 | 34021.9 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
