Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyttr dna-binding domain protein | EUBIFOR_02420 | Not Available | Positive | 2281271 - 2281705 | 17155.4 |
| hypothetical protein | EUBIFOR_02421 | Not Available | Positive | 2281702 - 2282370 | 25197.5 |
| toxin-antitoxin system, antitoxin component, hicb family | EUBIFOR_02422 | Not Available | Negative | 2282380 - 2282712 | 12621.1 |
| toxin-antitoxin system, toxin component, hica family | EUBIFOR_02423 | Not Available | Negative | 2282699 - 2283040 | 13396.3 |
| mate efflux family protein | EUBIFOR_02424 | Not Available | Negative | 2283130 - 2284488 | 49363.1 |
| methionine aminopeptidase, type i | EUBIFOR_02425 | Not Available | Negative | 2284516 - 2285382 | 31896.2 |
| rubredoxin | EUBIFOR_02426 | Not Available | Negative | 2285478 - 2286047 | 21284.1 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | EUBIFOR_02427 | Not Available | Negative | 2286145 - 2286993 | 31870.8 |
| peptide chain release factor 1 | EUBIFOR_02428 | Not Available | Negative | 2286993 - 2288069 | 40943.4 |
| mannosyl-glycoprotein endo-beta-n-acetylglucosaminidase | EUBIFOR_02429 | Not Available | Positive | 2288235 - 2289629 | 53482.7 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
