Kingdom
Bacillati
Phylum
Bacillota
Class
Erysipelotrichia
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Erysipelotrichia |
| Order | Erysipelotrichales |
| Family | Erysipelotrichaceae |
| Genus | Holdemanella |
| Species | Holdemanella biformis |
| Strain | DSM 3989 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
791004 bp
Thymine Count
808600 bp
Guanine Count
367604 bp
Cytosine Count
448712 bp
Genome Length
2415920 bp
Protein-coding Genes
2529 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EUBIFOR_00219 | Not Available | Negative | 229478 - 229672 | 7729.27 |
| transglycosylase | EUBIFOR_00220 | Not Available | Negative | 229889 - 230590 | 26542.5 |
| bacterial transferase hexapeptide repeat protein | EUBIFOR_00221 | Not Available | Negative | 230643 - 231317 | 24830.7 |
| phosphodiesterase family protein | EUBIFOR_00222 | Not Available | Negative | 231333 - 231800 | 17826.0 |
| serine-type d-ala-d-ala carboxypeptidase | EUBIFOR_00223 | Not Available | Negative | 231810 - 232769 | 37476.5 |
| excinuclease abc, c subunit | EUBIFOR_00224 | Not Available | Negative | 232886 - 234643 | 68176.9 |
| muts2 family protein | EUBIFOR_00225 | Not Available | Negative | 234652 - 236976 | 87059.1 |
| ribonuclease hiii | EUBIFOR_00226 | Not Available | Positive | 237028 - 237876 | 32041.7 |
| diguanylate cyclase (ggdef) domain protein | EUBIFOR_00227 | Not Available | Negative | 237873 - 239798 | 74841.7 |
| cytidine and deoxycytidylate deaminase zinc-binding region | EUBIFOR_00228 | Not Available | Negative | 239864 - 240343 | 18056.5 |
Pathways
363 pathways
Health Effects
No health effects information available for this bacterium.
