Providencia alcalifaciens DSM 30120

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Providencia

Description

Providencia alcalifaciens DSM 30120 is a Gram-negative, rod-shaped bacterium primarily found in the intestinal microflora of animals. This organism is classified as a facultative anaerobe, meaning it can thrive in both the presence and absence of oxygen, which is advantageous for its survival in varied environments within the gastrointestinal tract. As a chemoheterotroph, P. alcalifaciens derives its energy from organic compounds, making it dependent on the substrates available in its habitat. The bacterium is mobile, possessing flagella that facilitate its movement, which may play a role in its ecological interactions within the gut. P. alcalifaciens is nonsporulating and has a single replicon, indicating a simpler genomic architecture compared to some other bacteria. Its optimal growth temperature is 37 degrees Celsius, placing it within the mesophilic temperature range suitable for growth in warm-blooded hosts. The presence of P. alcalifaciens in the intestinal microflora suggests it may contribute to the complex ecosystem of gut bacteria, potentially influencing digestion and the overall health of its host. Its ability to adapt to varying oxygen conditions and its mobility may allow it to interact dynamically with other microbial populations in the gut, highlighting its potential role in maintaining microbial diversity and gut health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusProvidencia
SpeciesProvidencia alcalifaciens
StrainDSM 30120

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Providencia alcalifaciens DSM 30120
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Providencia alcalifaciens DSM 30120 P_alcalifaciens-1.0_Cont176.1,

Gene Summary

Adenine Count

1166239 bp

Thymine Count

1177167 bp

Guanine Count

849689 bp

Cytosine Count

836221 bp

Genome Length

4029346 bp

Protein-coding Genes

3684 genes

Non-Coding Genes

424 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttrNot AvailableNot AvailablePositive1853160 - 1853171Not Available
hypothetical proteinPROVALCAL_01917Not AvailablePositive1853166 - 18533516812.46
Putative integrasePROVALCAL_01918Not AvailableNegative1853357 - 185458046833.5
Carbamoyl phosphate synthase small subunitPROVALCAL_01919Not AvailableNegative1854781 - 185635858833.8
Orf012PROVALCAL_01920Not AvailableNegative1856459 - 185792551923.6
AttlNot AvailableNot AvailablePositive1941872 - 1941883Not Available
CapsidPROVALCAL_02011Not AvailableNegative1945095 - 194591330607.4
Portal proteinPROVALCAL_02012Not AvailableNegative1946028 - 194725145802.6
hypothetical proteinPROVALCAL_02013Not AvailableNegative1947241 - 19474025553.09
Terminase large subunitPROVALCAL_02014Not AvailableNegative1947399 - 194908763174.0

Displaying genes 271 – 280 of 4108 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

648 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da

Displaying 1–10 of 648 metabolites

Health Effects

No health effects information available for this bacterium.