Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| papain family cysteine protease | BACDOR_00959 | Not Available | Negative | 1129498 - 1130688 | 45264.6 |
| peptidase, c69 family | BACDOR_00960 | Not Available | Negative | 1130720 - 1132318 | 60197.0 |
| cyclic nucleotide-binding domain protein | BACDOR_00961 | Not Available | Positive | 1132462 - 1133040 | 22568.6 |
| hypothetical protein | BACDOR_00962 | Not Available | Negative | 1133037 - 1134509 | 56284.2 |
| hypothetical protein | BACDOR_00963 | Not Available | Negative | 1134546 - 1135937 | 48813.4 |
| amp-binding enzyme | BACDOR_00964 | Not Available | Negative | 1136185 - 1137843 | 62550.8 |
| putative dihydroorotate dehydrogenase 2 | BACDOR_00965 | Not Available | Negative | 1138033 - 1139040 | 36856.9 |
| pyridoxal phosphate enzyme, yggs family | BACDOR_00966 | Not Available | Negative | 1139021 - 1139689 | 25387.4 |
| hypothetical protein | BACDOR_00967 | Not Available | Negative | 1139722 - 1140204 | 18239.6 |
| hypothetical protein | BACDOR_00968 | Not Available | Negative | 1140300 - 1141535 | 46220.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

