Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02757 family protein | BACDOR_00689 | Not Available | Positive | 850555 - 851319 | 29688.4 |
| putative glucosamine-6-phosphate deaminase | BACDOR_00690 | Not Available | Negative | 851495 - 853483 | 74778.2 |
| glucosamine-6-phosphate deaminase | BACDOR_00691 | Not Available | Negative | 853487 - 854278 | 29021.6 |
| transporter, major facilitator family protein | BACDOR_00692 | Not Available | Negative | 854325 - 855560 | 44643.4 |
| n-acylglucosamine 2-epimerase | BACDOR_00693 | Not Available | Negative | 855579 - 856775 | 46210.0 |
| dihydrodipicolinate synthetase family | BACDOR_00694 | Not Available | Negative | 856788 - 857702 | 33940.9 |
| rok family protein | BACDOR_00695 | Not Available | Positive | 858008 - 859213 | 44586.1 |
| sigma-70 region 2 | BACDOR_00696 | Not Available | Positive | 859328 - 859963 | 24925.2 |
| sigma factor regulatory protein, fecr/pupr family | BACDOR_00697 | Not Available | Positive | 860171 - 861253 | 41255.3 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_00698 | Not Available | Positive | 861402 - 865139 | 139625.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

