Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | DSM 17855 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1561819 bp
Thymine Count
1621837 bp
Guanine Count
1209139 bp
Cytosine Count
1094938 bp
Genome Length
5487768 bp
Protein-coding Genes
4961 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, luxr family | BACDOR_00039 | Not Available | Positive | 42485 - 43180 | 26643.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | BACDOR_00040 | Not Available | Negative | 43177 - 44241 | 39724.6 |
| cysteine synthase a | BACDOR_00041 | Not Available | Negative | 44251 - 45198 | 33435.5 |
| endonuclease/exonuclease/phosphatase family protein | BACDOR_00042 | Not Available | Positive | 45344 - 46282 | 35257.1 |
| pqq enzyme repeat protein | BACDOR_00043 | Not Available | Positive | 46305 - 48761 | 89566.2 |
| dead/deah box helicase | BACDOR_00044 | Not Available | Positive | 48962 - 50266 | 48234.6 |
| hypothetical protein | BACDOR_00045 | Not Available | Positive | 50311 - 50439 | 5020.31 |
| tonb-linked outer membrane protein, susc/raga family | BACDOR_00046 | Not Available | Positive | 50931 - 54167 | 120081.0 |
| susd family protein | BACDOR_00047 | Not Available | Positive | 54188 - 56203 | 75955.4 |
| hypothetical protein | BACDOR_00048 | Not Available | Negative | 56332 - 56478 | 5572.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

